Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombination protein recr | BerOc1_00091 | Not Available | Negative | 91943 - 92548 | 21798.7 |
| nucleoid-associated protein | BerOc1_00092 | Not Available | Negative | 92642 - 92953 | 11142.8 |
| dna polymerase iii subunit tau | BerOc1_00093 | Not Available | Negative | 92977 - 94824 | 66444.9 |
| branched-chain-amino-acid aminotransferase | BerOc1_00094 | Not Available | Negative | 94957 - 95880 | 33949.4 |
| glutamate-pyruvate aminotransferase alac | BerOc1_00095 | Not Available | Positive | 96099 - 97310 | 45112.4 |
| homoserine dehydrogenase | BerOc1_00096 | Not Available | Positive | 97313 - 98611 | 46229.9 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | BerOc1_00097 | Not Available | Positive | 98623 - 99816 | 42774.9 |
| acyl-coa thioester hydrolase ybgc | BerOc1_00098 | Not Available | Positive | 99816 - 100235 | 16147.2 |
| amidohydrolase | BerOc1_00099 | Not Available | Positive | 100321 - 101106 | 29449.3 |
| hypothetical protein | BerOc1_00100 | Not Available | Positive | 101201 - 101422 | 8000.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
