Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cbs domain protein | BerOc1_01194 | Not Available | Positive | 1311768 - 1312259 | 18820.1 |
| cyclic di-gmp phosphodiesterase response regulator rpfg | BerOc1_01195 | Not Available | Negative | 1312343 - 1313353 | 38318.4 |
| pyruvate kinase | BerOc1_01196 | Not Available | Negative | 1313361 - 1314803 | 52268.6 |
| protein mraz | BerOc1_01197 | Not Available | Positive | 1315082 - 1315528 | 16810.1 |
| ribosomal rna small subunit methyltransferase h | BerOc1_01198 | Not Available | Positive | 1315625 - 1316509 | 32309.8 |
| cell division protein ftsl | BerOc1_01199 | Not Available | Positive | 1316506 - 1316787 | 10327.0 |
| penicillin-binding protein 2 | BerOc1_01200 | Not Available | Positive | 1316840 - 1318801 | 71857.1 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | BerOc1_01201 | Not Available | Positive | 1318776 - 1320299 | 55595.0 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | BerOc1_01202 | Not Available | Positive | 1320296 - 1321684 | 49560.6 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | BerOc1_01203 | Not Available | Positive | 1321681 - 1322757 | 38956.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
