Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BerOc1_01184 | Not Available | Negative | 1303072 - 1303374 | 11268.2 |
| hypothetical protein | BerOc1_01185 | Not Available | Negative | 1303502 - 1304131 | 22382.8 |
| fused nickel transport protein nikmn | BerOc1_01186 | Not Available | Negative | 1304174 - 1304770 | 20446.7 |
| 5'-nucleotidase | BerOc1_01187 | Not Available | Positive | 1304973 - 1306220 | 47413.4 |
| trans-aconitate 2-methyltransferase | BerOc1_01188 | Not Available | Negative | 1306234 - 1307595 | 50967.9 |
| d-ribose-binding periplasmic protein precursor | BerOc1_01189 | Not Available | Negative | 1307724 - 1308701 | 35067.4 |
| 23s rrna (uracil-c(5))-methyltransferase rlmcd | BerOc1_01190 | Not Available | Negative | 1308785 - 1310167 | 50043.8 |
| hypothetical protein | BerOc1_01191 | Not Available | Positive | 1310286 - 1310594 | 11486.1 |
| hypothetical protein | BerOc1_01192 | Not Available | Positive | 1310591 - 1310866 | 10390.7 |
| hypothetical protein | BerOc1_01193 | Not Available | Negative | 1310863 - 1311627 | 29371.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
