Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit m | BerOc1_01054 | Not Available | Positive | 1145221 - 1146678 | 52095.9 |
| nadh-quinone oxidoreductase subunit n | BerOc1_01055 | Not Available | Positive | 1146694 - 1148097 | 48096.5 |
| succinate-semialdehyde dehydrogenase | BerOc1_01056 | Not Available | Negative | 1148321 - 1149712 | 50309.0 |
| calcium-transporting atpase 1 | BerOc1_01057 | Not Available | Negative | 1150092 - 1152602 | 90641.0 |
| glucans biosynthesis protein | BerOc1_01058 | Not Available | Positive | 1153000 - 1154016 | 37142.5 |
| putative monooxygenase | BerOc1_01059 | Not Available | Negative | 1154043 - 1154339 | 10855.9 |
| ecf rna polymerase sigma-e factor | BerOc1_01060 | Not Available | Positive | 1154766 - 1155365 | 22752.4 |
| hypothetical protein | BerOc1_01061 | Not Available | Positive | 1155355 - 1155654 | 10899.2 |
| hypothetical protein | BerOc1_01062 | Not Available | Positive | 1155665 - 1156087 | 15705.0 |
| Trna-sec(p) | Not Available | Not Available | Positive | 1156430 - 1156519 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
