Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| orotate phosphoribosyltransferase | BerOc1_01004 | Not Available | Positive | 1092932 - 1093672 | 26911.8 |
| 50s ribosomal protein l21 | BerOc1_01005 | Not Available | Positive | 1093796 - 1094107 | 11257.4 |
| 50s ribosomal protein l27 | BerOc1_01006 | Not Available | Positive | 1094128 - 1094397 | 9573.63 |
| gtpase obg/cgta | BerOc1_01007 | Not Available | Positive | 1094506 - 1095534 | 36964.1 |
| carboxymuconolactone decarboxylase family protein | BerOc1_01008 | Not Available | Negative | 1095538 - 1095912 | 13628.4 |
| hca operon transcriptional activator | BerOc1_01009 | Not Available | Positive | 1096002 - 1096964 | 35068.4 |
| hypothetical protein | BerOc1_01010 | Not Available | Negative | 1097000 - 1098748 | 63721.9 |
| glutamate 5-kinase 1 | BerOc1_01011 | Not Available | Positive | 1098945 - 1100105 | 41295.6 |
| bacillibactin exporter | BerOc1_01012 | Not Available | Positive | 1100105 - 1101301 | 42852.4 |
| hypothetical protein | BerOc1_01013 | Not Available | Positive | 1101308 - 1101454 | 5704.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
