Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BerOc1_00974 | Not Available | Positive | 1061667 - 1063046 | 51860.9 |
| hypothetical protein | BerOc1_00975 | Not Available | Negative | 1063174 - 1064031 | 34082.0 |
| radical sam superfamily protein | BerOc1_00976 | Not Available | Negative | 1064084 - 1065937 | 71561.8 |
| chaperone protein htpg | BerOc1_00977 | Not Available | Negative | 1065912 - 1067510 | 61469.7 |
| aaa-like domain protein | BerOc1_00978 | Not Available | Negative | 1067524 - 1069194 | 63150.2 |
| hypothetical protein | BerOc1_00979 | Not Available | Negative | 1069204 - 1070349 | 43801.9 |
| restriction endonuclease | BerOc1_00980 | Not Available | Negative | 1070567 - 1071487 | 34439.1 |
| secreted effector protein pipb2 | BerOc1_00981 | Not Available | Positive | 1073595 - 1074716 | 40738.4 |
| secreted effector protein pipb | BerOc1_00982 | Not Available | Positive | 1074779 - 1075696 | 34087.1 |
| Trna-ala | Not Available | Not Available | Positive | 1076087 - 1076162 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
