Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase kdsc | BerOc1_00060 | Not Available | Negative | 57364 - 57888 | 18951.0 |
| 2-dehydro-3-deoxyphosphooctonate aldolase | BerOc1_00061 | Not Available | Negative | 57881 - 58684 | 28427.4 |
| ctp synthase | BerOc1_00062 | Not Available | Negative | 58688 - 60325 | 60650.9 |
| phosphoribosylformylglycinamidine synthase | BerOc1_00063 | Not Available | Positive | 60499 - 61314 | 29867.5 |
| pp_00064 | BerOc1_00064 | Not Available | Positive | 61323 - 61811 | Not Available |
| dinitrogenase iron-molybdenum cofactor | BerOc1_00065 | Not Available | Positive | 61887 - 62273 | 14000.8 |
| hypothetical protein | BerOc1_00067 | Not Available | Positive | 62673 - 63302 | 23674.2 |
| blue-light-activated histidine kinase 2 | BerOc1_00068 | Not Available | Positive | 63931 - 65097 | 43689.1 |
| bicyclomycin resistance protein | BerOc1_00069 | Not Available | Positive | 65459 - 66772 | 47159.1 |
| tscpd domain protein | BerOc1_00070 | Not Available | Negative | 66915 - 67208 | 10490.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
