Ottowia oryzae str. KADR8-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Ottowia

Description

Ottowia oryzae str. KADR8-3 is characterized by a single replicon and is associated with the accession NZ_CP027666.1. This bacterium belongs to the genus Ottowia, which is recognized for its ecological roles and metabolic capabilities. The presence of a single replicon suggests a streamlined genomic organization that may contribute to its adaptability and efficiency in various environments. Ottowia species are generally known for their capacity to degrade complex organic compounds, which can be beneficial in bioremediation processes. The specific traits of Ottowia oryzae str. KADR8-3 may indicate its potential role in nutrient cycling and organic matter decomposition within its ecological niche. The study of Ottowia oryzae str. KADR8-3 provides insights into the biodiversity of microbial communities and their functional roles in ecosystems, particularly in environments where organic material is abundant. Understanding the traits of this strain can enhance knowledge regarding microbial interactions and their contributions to ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusOttowia
SpeciesOttowia oryzae
StrainKADR8-3

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ottowia oryzae strain KADR8-3 chromosome, complete genome.

Gene Summary

Adenine Count

648900 bp

Thymine Count

646340 bp

Guanine Count

1299122 bp

Cytosine Count

1306649 bp

Genome Length

3901011 bp

Protein-coding Genes

3473 genes

Non-Coding Genes

133 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar kinaseC6570_RS17035Not AvailablePositive3725121 - 372605933828.5
mbl fold metallo-hydrolaseC6570_RS17040Not AvailableNegative3726185 - 372693127558.3
c40 family peptidaseC6570_RS17045Not AvailableNegative3727148 - 372783723814.3
low molecular weight protein-tyrosine-phosphataseC6570_RS17050Not AvailableNegative3728118 - 372859116866.9
duf333 domain-containing proteinC6570_RS17055Not AvailableNegative3728820 - 37290929386.28
signal recognition particle proteinC6570_RS17060Not AvailableNegative3729412 - 373083050135.8
inner membrane protein ypjdC6570_RS17065Not AvailablePositive3730927 - 373173629171.2
pp0621 family proteinC6570_RS18525Not AvailablePositive3731733 - 37319578133.04
sensor histidine kinaseC6570_RS17075Not AvailablePositive3731954 - 373371463652.9
sigma-54-dependent transcriptional regulatorC6570_RS17080Not AvailablePositive3733711 - 373528255720.5

Displaying genes 3441 – 3450 of 3606 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.