Ottowia oryzae str. KADR8-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Ottowia

Description

Ottowia oryzae str. KADR8-3 is characterized by a single replicon and is associated with the accession NZ_CP027666.1. This bacterium belongs to the genus Ottowia, which is recognized for its ecological roles and metabolic capabilities. The presence of a single replicon suggests a streamlined genomic organization that may contribute to its adaptability and efficiency in various environments. Ottowia species are generally known for their capacity to degrade complex organic compounds, which can be beneficial in bioremediation processes. The specific traits of Ottowia oryzae str. KADR8-3 may indicate its potential role in nutrient cycling and organic matter decomposition within its ecological niche. The study of Ottowia oryzae str. KADR8-3 provides insights into the biodiversity of microbial communities and their functional roles in ecosystems, particularly in environments where organic material is abundant. Understanding the traits of this strain can enhance knowledge regarding microbial interactions and their contributions to ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusOttowia
SpeciesOttowia oryzae
StrainKADR8-3

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ottowia oryzae strain KADR8-3 chromosome, complete genome.

Gene Summary

Adenine Count

648900 bp

Thymine Count

646340 bp

Guanine Count

1299122 bp

Cytosine Count

1306649 bp

Genome Length

3901011 bp

Protein-coding Genes

3473 genes

Non-Coding Genes

133 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nudix hydrolaseC6570_RS15540Not AvailableNegative3401662 - 340221020582.7
cysteine synthase cysmC6570_RS15545Not AvailableNegative3402273 - 340317532577.0
Trna-leuNot AvailableNot AvailablePositive3403216 - 3403302Not Available
nad-dependent epimerase/dehydratase family proteinC6570_RS15555Not AvailableNegative3403541 - 340447333217.1
cdp-6-deoxy-delta-3,4-glucoseen reductaseC6570_RS15560Not AvailablePositive3404524 - 340556737957.6
bug family tripartite tricarboxylate transporter substrate binding proteinC6570_RS15565Not AvailablePositive3405657 - 340662233575.7
branched-chain amino acid abc transporter substrate-binding proteinC6570_RS15570Not AvailableNegative3406702 - 340779338370.9
marr family winged helix-turn-helix transcriptional regulatorC6570_RS15575Not AvailableNegative3408004 - 340848617196.4
siderophore-interacting proteinC6570_RS15580Not AvailablePositive3408522 - 340931028344.6
abc transporter atp-binding proteinC6570_RS15585Not AvailableNegative3409560 - 341027625571.5

Displaying genes 3141 – 3150 of 3606 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.