Ottowia oryzae str. KADR8-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Ottowia

Description

Ottowia oryzae str. KADR8-3 is characterized by a single replicon and is associated with the accession NZ_CP027666.1. This bacterium belongs to the genus Ottowia, which is recognized for its ecological roles and metabolic capabilities. The presence of a single replicon suggests a streamlined genomic organization that may contribute to its adaptability and efficiency in various environments. Ottowia species are generally known for their capacity to degrade complex organic compounds, which can be beneficial in bioremediation processes. The specific traits of Ottowia oryzae str. KADR8-3 may indicate its potential role in nutrient cycling and organic matter decomposition within its ecological niche. The study of Ottowia oryzae str. KADR8-3 provides insights into the biodiversity of microbial communities and their functional roles in ecosystems, particularly in environments where organic material is abundant. Understanding the traits of this strain can enhance knowledge regarding microbial interactions and their contributions to ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusOttowia
SpeciesOttowia oryzae
StrainKADR8-3

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ottowia oryzae strain KADR8-3 chromosome, complete genome.

Gene Summary

Adenine Count

648900 bp

Thymine Count

646340 bp

Guanine Count

1299122 bp

Cytosine Count

1306649 bp

Genome Length

3901011 bp

Protein-coding Genes

3473 genes

Non-Coding Genes

133 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoribosylformylglycinamidine cyclo-ligaseC6570_RS12600Not AvailablePositive2761122 - 276216536138.8
ai-2e family transporterC6570_RS12605Not AvailablePositive2762313 - 276333536663.3
isochorismatase family proteinC6570_RS12610Not AvailablePositive2763568 - 276412519686.4
dj-1/pfpi family proteinC6570_RS12615Not AvailablePositive2764122 - 276474822526.1
antibiotic biosynthesis monooxygenase family proteinC6570_RS12620Not AvailablePositive2764814 - 276514011856.8
acyltransferaseC6570_RS12625Not AvailablePositive2765208 - 276618435261.4
sirb1 family proteinC6570_RS12630Not AvailableNegative2766448 - 276729631410.3
murein biosynthesis integral membrane protein murjC6570_RS12635Not AvailableNegative2767417 - 276897054933.9
30s ribosomal protein s20C6570_RS12640Not AvailablePositive2769107 - 276940910732.2
sdr family oxidoreductaseC6570_RS12645Not AvailableNegative2769663 - 277043628169.8

Displaying genes 2551 – 2560 of 3606 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.