Ottowia oryzae str. KADR8-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Ottowia

Description

Ottowia oryzae str. KADR8-3 is characterized by a single replicon and is associated with the accession NZ_CP027666.1. This bacterium belongs to the genus Ottowia, which is recognized for its ecological roles and metabolic capabilities. The presence of a single replicon suggests a streamlined genomic organization that may contribute to its adaptability and efficiency in various environments. Ottowia species are generally known for their capacity to degrade complex organic compounds, which can be beneficial in bioremediation processes. The specific traits of Ottowia oryzae str. KADR8-3 may indicate its potential role in nutrient cycling and organic matter decomposition within its ecological niche. The study of Ottowia oryzae str. KADR8-3 provides insights into the biodiversity of microbial communities and their functional roles in ecosystems, particularly in environments where organic material is abundant. Understanding the traits of this strain can enhance knowledge regarding microbial interactions and their contributions to ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusOttowia
SpeciesOttowia oryzae
StrainKADR8-3

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ottowia oryzae strain KADR8-3 chromosome, complete genome.

Gene Summary

Adenine Count

648900 bp

Thymine Count

646340 bp

Guanine Count

1299122 bp

Cytosine Count

1306649 bp

Genome Length

3901011 bp

Protein-coding Genes

3473 genes

Non-Coding Genes

133 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type i-f crispr-associated protein csy1C6570_RS00545Not AvailableNegative128291 - 12965250625.2
type i-f crispr-associated helicase cas3fC6570_RS00550Not AvailableNegative129750 - 133295130410.0
type i-f crispr-associated endonuclease cas1fC6570_RS00555Not AvailableNegative133435 - 13433132882.3
coa-acylating methylmalonate-semialdehyde dehydrogenaseC6570_RS00560Not AvailableNegative134488 - 13601454569.7
dj-1/pfpi family proteinC6570_RS00565Not AvailableNegative136089 - 13671821902.6
aspartate aminotransferase family proteinC6570_RS00570Not AvailableNegative136805 - 13816948008.4
lysr family transcriptional regulatorC6570_RS00575Not AvailablePositive138290 - 13928235952.2
acetyl-coa hydrolase/transferase family proteinC6570_RS00580Not AvailableNegative139489 - 14095852909.2
superoxide dismutase family proteinC6570_RS00585Not AvailableNegative141306 - 14189019657.0
solute carrier family 23 proteinC6570_RS00590Not AvailableNegative142022 - 14330844144.4

Displaying genes 221 – 230 of 3606 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.