Ottowia oryzae str. KADR8-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Ottowia

Description

Ottowia oryzae str. KADR8-3 is characterized by a single replicon and is associated with the accession NZ_CP027666.1. This bacterium belongs to the genus Ottowia, which is recognized for its ecological roles and metabolic capabilities. The presence of a single replicon suggests a streamlined genomic organization that may contribute to its adaptability and efficiency in various environments. Ottowia species are generally known for their capacity to degrade complex organic compounds, which can be beneficial in bioremediation processes. The specific traits of Ottowia oryzae str. KADR8-3 may indicate its potential role in nutrient cycling and organic matter decomposition within its ecological niche. The study of Ottowia oryzae str. KADR8-3 provides insights into the biodiversity of microbial communities and their functional roles in ecosystems, particularly in environments where organic material is abundant. Understanding the traits of this strain can enhance knowledge regarding microbial interactions and their contributions to ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusOttowia
SpeciesOttowia oryzae
StrainKADR8-3

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ottowia oryzae strain KADR8-3 chromosome, complete genome.

Gene Summary

Adenine Count

648900 bp

Thymine Count

646340 bp

Guanine Count

1299122 bp

Cytosine Count

1306649 bp

Genome Length

3901011 bp

Protein-coding Genes

3473 genes

Non-Coding Genes

133 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid abc transporter permeaseC6570_RS00450Not AvailableNegative96132 - 9679423234.2
glutamate abc transporter substrate-binding proteinC6570_RS00455Not AvailableNegative96798 - 9770031292.4
septal ring lytic transglycosylase rlpa family proteinC6570_RS00460Not AvailableNegative97963 - 9849318580.8
methylenetetrahydrofolate reductaseC6570_RS00465Not AvailableNegative99103 - 9993330039.7
tlya family rna methyltransferaseC6570_RS00470Not AvailableNegative99965 - 10098135964.9
adenosylhomocysteinaseC6570_RS00475Not AvailableNegative101201 - 10263752033.8
yjfi family proteinC6570_RS00480Not AvailablePositive103001 - 10341714855.8
pspa/im30 family proteinC6570_RS00485Not AvailablePositive103449 - 10419526673.5
hypothetical proteinC6570_RS00490Not AvailablePositive104225 - 10459013366.1
ubiquinone biosynthesis proteinC6570_RS00495Not AvailablePositive104639 - 10526822585.0

Displaying genes 201 – 210 of 3606 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.