Ottowia oryzae str. KADR8-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Ottowia

Description

Ottowia oryzae str. KADR8-3 is characterized by a single replicon and is associated with the accession NZ_CP027666.1. This bacterium belongs to the genus Ottowia, which is recognized for its ecological roles and metabolic capabilities. The presence of a single replicon suggests a streamlined genomic organization that may contribute to its adaptability and efficiency in various environments. Ottowia species are generally known for their capacity to degrade complex organic compounds, which can be beneficial in bioremediation processes. The specific traits of Ottowia oryzae str. KADR8-3 may indicate its potential role in nutrient cycling and organic matter decomposition within its ecological niche. The study of Ottowia oryzae str. KADR8-3 provides insights into the biodiversity of microbial communities and their functional roles in ecosystems, particularly in environments where organic material is abundant. Understanding the traits of this strain can enhance knowledge regarding microbial interactions and their contributions to ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusOttowia
SpeciesOttowia oryzae
StrainKADR8-3

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ottowia oryzae strain KADR8-3 chromosome, complete genome.

Gene Summary

Adenine Count

648900 bp

Thymine Count

646340 bp

Guanine Count

1299122 bp

Cytosine Count

1306649 bp

Genome Length

3901011 bp

Protein-coding Genes

3473 genes

Non-Coding Genes

133 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf1800 domain-containing proteinC6570_RS07365Not AvailableNegative1570502 - 157246068997.8
trna (adenosine(37)-n6)-dimethylallyltransferase miaaC6570_RS07370Not AvailableNegative1572564 - 157357735953.4
alpha/beta hydrolaseC6570_RS07375Not AvailableNegative1574615 - 157552032283.5
ligase-associated dna damage response endonuclease pdemC6570_RS07380Not AvailableNegative1575581 - 157626724352.3
ligase-associated dna damage response dexh box helicaseC6570_RS07385Not AvailableNegative1576351 - 1579359107133.0
cisplatin damage response atp-dependent dna ligaseC6570_RS07395Not AvailableNegative1579356 - 158120666427.3
ligase-associated dna damage response exonucleaseC6570_RS07400Not AvailableNegative1581210 - 158248444676.0
pyridoxamine 5'-phosphate oxidase family proteinC6570_RS07405Not AvailableNegative1582484 - 158300518943.2
glycerophosphodiester phosphodiesteraseC6570_RS07410Not AvailablePositive1583229 - 158438642147.9
glycine zipper domain-containing proteinC6570_RS07415Not AvailableNegative1584472 - 158495416891.5

Displaying genes 1501 – 1510 of 3606 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.