Desulfonatronum sp. SC1

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfonatronaceae

Genus

Desulfonatronum

Description

Desulfonatronum sp. SC1 is characterized by having a single replicon, which is a significant trait for its genomic organization. The organism is cataloged under the accession number PZKN00000000.1, which serves as a unique identifier for its genomic data in biological databases. This bacterium is likely part of a unique ecological niche due to its metabolic capabilities, although specific metabolic pathways and ecological roles are not detailed in the provided information. The presence of a single replicon may suggest a streamlined genome, which can be beneficial for efficient replication and adaptation to its environmental conditions. Understanding Desulfonatronum sp. SC1 can contribute to insights into microbial diversity and functionality, particularly in environments where sulfur compounds are prevalent. Its potential roles in biogeochemical cycles could be significant, although specific interactions and impacts on the ecosystem are not specified. Further research on this organism may reveal important ecological functions, particularly in sulfur cycling or bioremediation processes, given its genus affiliation.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfonatronaceae
GenusDesulfonatronum
SpeciesDesulfonatronum sp. SC1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfonatronum sp. SC1 NODE_257_length_247_cov_1337.35, whole

Gene Summary

Adenine Count

859132 bp

Thymine Count

863442 bp

Guanine Count

1218393 bp

Cytosine Count

1223207 bp

Genome Length

4164174 bp

Protein-coding Genes

3695 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dipeptide abc transporter atp-binding protein dppdC6366_00635Not AvailablePositive131892 - 13281533722.0
peptide abc transporter atp-binding proteinC6366_00640Not AvailablePositive132800 - 13381936232.1
trna 2-thiocytidine biosynthesis protein ttcaC6366_00645Not AvailablePositive134095 - 13486228630.9
peptidase m24C6366_00650Not AvailablePositive135161 - 13606633956.8
c4-dicarboxylate abc transporter substrate-binding proteinC6366_00655Not AvailablePositive136466 - 13745535031.4
c4-dicarboxylate abc transporter permeaseC6366_00660Not AvailablePositive137717 - 13976274172.9
trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trmlC6366_00665Not AvailableNegative140066 - 14053017294.8
sel1 repeat family proteinC6366_00670Not AvailableNegative140538 - 14144933554.7
gaf domain-containing proteinC6366_00675Not AvailablePositive141789 - 14234920655.9
type i glyceraldehyde-3-phosphate dehydrogenaseC6366_00680Not AvailablePositive142432 - 14345137135.6

Displaying genes 131 – 140 of 3753 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.