Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium punjabense |
| Strain | SS95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168290 bp
Thymine Count
1168741 bp
Guanine Count
1189553 bp
Cytosine Count
1205947 bp
Genome Length
4732531 bp
Protein-coding Genes
4173 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | C9I36_04815 | Not Available | Positive | 1034506 - 1034976 | 17640.4 |
| penicillin-binding protein 2 | C9I36_04820 | Not Available | Positive | 1035010 - 1036914 | 71434.1 |
| rod shape-determining protein roda | C9I36_04825 | Not Available | Positive | 1036924 - 1038036 | 40571.7 |
| endolytic peptidoglycan transglycosylase rlpa | C9I36_04830 | Not Available | Positive | 1038050 - 1039171 | 39169.9 |
| serine-type d-ala-d-ala carboxypeptidase | C9I36_04835 | Not Available | Positive | 1039338 - 1040549 | 44089.8 |
| hypothetical protein | C9I36_04840 | Not Available | Positive | 1040686 - 1040949 | 9846.98 |
| octanoyltransferase | C9I36_04845 | Not Available | Positive | 1041106 - 1041780 | 24872.2 |
| lipoyl synthase | C9I36_04850 | Not Available | Positive | 1042008 - 1042973 | 36194.8 |
| twin-arginine translocase subunit tate | C9I36_04855 | Not Available | Negative | 1043057 - 1043254 | 6864.36 |
| fluoride efflux transporter crcb | C9I36_04860 | Not Available | Positive | 1043715 - 1044098 | 13250.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
