Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium punjabense |
| Strain | SS95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168290 bp
Thymine Count
1168741 bp
Guanine Count
1189553 bp
Cytosine Count
1205947 bp
Genome Length
4732531 bp
Protein-coding Genes
4173 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gmp reductase | C9I36_02730 | Not Available | Positive | 582101 - 583141 | 37185.9 |
| type iv pilin biogenesis protein | C9I36_02735 | Not Available | Negative | 583229 - 584434 | 45206.0 |
| type ii secretion system protein gspe | C9I36_02740 | Not Available | Negative | 584431 - 585903 | 54076.2 |
| prepilin peptidase-dependent pilin | C9I36_02745 | Not Available | Negative | 585906 - 586352 | 15582.6 |
| nicotinate-nucleotide diphosphorylase | C9I36_02750 | Not Available | Negative | 586678 - 587568 | 32126.4 |
| nucleoside-specific channel-forming protein tsx | C9I36_02755 | Not Available | Negative | 587713 - 588579 | 32446.2 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | C9I36_02760 | Not Available | Positive | 588979 - 589554 | 21615.4 |
| regulatory signaling modulator protein ampe | C9I36_02765 | Not Available | Positive | 589551 - 590405 | 31727.0 |
| aromatic amino acid transporter arop | C9I36_02770 | Not Available | Negative | 590486 - 591844 | 48946.3 |
| pyruvate dehydrogenase complex transcriptional repressor pdhr | C9I36_02775 | Not Available | Positive | 592503 - 593267 | 29102.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
