Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium punjabense |
| Strain | SS95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168290 bp
Thymine Count
1168741 bp
Guanine Count
1189553 bp
Cytosine Count
1205947 bp
Genome Length
4732531 bp
Protein-coding Genes
4173 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated helicase/endonuclease cas3 | C9I36_20390 | Not Available | Positive | 4446400 - 4449120 | 101696.0 |
| growth inhibitor pemk | C9I36_20395 | Not Available | Negative | 4449126 - 4449491 | 12876.5 |
| antitoxin | C9I36_20400 | Not Available | Negative | 4449491 - 4449766 | 10119.2 |
| type i-e crispr-associated protein cse1/casa | C9I36_20405 | Not Available | Positive | 4450429 - 4451997 | 58576.9 |
| type i-e crispr-associated protein cse2/casb | C9I36_20410 | Not Available | Positive | 4451981 - 4452616 | 23800.0 |
| type i-e crispr-associated protein cas7/cse4/casc | C9I36_20415 | Not Available | Positive | 4452620 - 4453684 | 38751.6 |
| type i-e crispr-associated protein cas5/casd | C9I36_20420 | Not Available | Positive | 4453694 - 4454428 | 27568.5 |
| type i-e crispr-associated protein cas6/cse3/case | C9I36_20425 | Not Available | Positive | 4454428 - 4455075 | 24354.0 |
| subtype i-e crispr-associated endonuclease cas1 | C9I36_20430 | Not Available | Positive | 4455103 - 4456020 | 33186.2 |
| type i-e crispr-associated endoribonuclease cas2 | C9I36_20435 | Not Available | Positive | 4456021 - 4456314 | 11106.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
