Pectobacterium punjabense str. SS95

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Pectobacterium

Description

Pectobacterium punjabense str. SS95 is a Gram-negative bacterium characterized by the presence of flagella, which facilitates motility. This organism possesses a single replicon, indicating a streamlined genetic structure. The genomic data for P. punjabense str. SS95 is available under the accession number PYSO00000000.1, contributing to its classification and further study within the microbial taxonomy. As a member of the Pectobacterium genus, P. punjabense is known to be involved in plant-pathogenic interactions, particularly affecting various crops. The motility conferred by its flagella may enhance its ability to colonize plant tissues and contribute to disease development. Understanding the genetic and physiological traits of P. punjabense str. SS95 can provide insights into its ecological role and its impact on agricultural systems, particularly in regions where it may pose a threat to crop health. This bacterium exemplifies the importance of studying microbial traits in understanding their ecological interactions and potential impacts on agriculture. The data associated with P. punjabense str. SS95 underscores the relevance of genomic resources in the ongoing research of plant pathogens and their management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusPectobacterium
SpeciesPectobacterium punjabense
StrainSS95

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pectobacterium punjabense strain SS95 FAU289, whole genome shotgun

Gene Summary

Adenine Count

1168290 bp

Thymine Count

1168741 bp

Guanine Count

1189553 bp

Cytosine Count

1205947 bp

Genome Length

4732531 bp

Protein-coding Genes

4173 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
electron transport complex subunit rsxgC9I36_17040Not AvailablePositive3721646 - 372227522683.3
electron transport complex subunit rsxeC9I36_17045Not AvailablePositive3722272 - 372297924664.8
endonuclease iiiC9I36_17050Not AvailablePositive3722976 - 372361123330.3
dipeptide/tripeptide permease dtpaC9I36_17055Not AvailablePositive3724280 - 372579754855.2
hth-type transcriptional regulator cysbC9I36_17060Not AvailableNegative3725918 - 372689235928.1
hypothetical proteinC9I36_17065Not AvailablePositive3727018 - 37272187229.85
type i dna topoisomeraseC9I36_17070Not AvailableNegative3727474 - 373007497327.0
hypothetical proteinC9I36_17075Not AvailablePositive3730400 - 373066910263.2
protease sohbC9I36_17080Not AvailableNegative3730725 - 373177138771.1
ycik family oxidoreductaseC9I36_17085Not AvailablePositive3732124 - 373288527589.3

Displaying genes 3351 – 3360 of 4270 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.