Pectobacterium punjabense str. SS95

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Pectobacterium

Description

Pectobacterium punjabense str. SS95 is a Gram-negative bacterium characterized by the presence of flagella, which facilitates motility. This organism possesses a single replicon, indicating a streamlined genetic structure. The genomic data for P. punjabense str. SS95 is available under the accession number PYSO00000000.1, contributing to its classification and further study within the microbial taxonomy. As a member of the Pectobacterium genus, P. punjabense is known to be involved in plant-pathogenic interactions, particularly affecting various crops. The motility conferred by its flagella may enhance its ability to colonize plant tissues and contribute to disease development. Understanding the genetic and physiological traits of P. punjabense str. SS95 can provide insights into its ecological role and its impact on agricultural systems, particularly in regions where it may pose a threat to crop health. This bacterium exemplifies the importance of studying microbial traits in understanding their ecological interactions and potential impacts on agriculture. The data associated with P. punjabense str. SS95 underscores the relevance of genomic resources in the ongoing research of plant pathogens and their management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusPectobacterium
SpeciesPectobacterium punjabense
StrainSS95

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pectobacterium punjabense strain SS95 FAU289, whole genome shotgun

Gene Summary

Adenine Count

1168290 bp

Thymine Count

1168741 bp

Guanine Count

1189553 bp

Cytosine Count

1205947 bp

Genome Length

4732531 bp

Protein-coding Genes

4173 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii secretion system protein gspjC9I36_16225Not AvailablePositive3530391 - 353104124839.9
type ii secretion protein kC9I36_16230Not AvailablePositive3531038 - 353202436750.2
type ii secretion system protein gsplC9I36_16235Not AvailablePositive3532021 - 353329847722.7
type ii secretion system protein mC9I36_16240Not AvailablePositive3533295 - 353378918958.7
type ii secretion protein nC9I36_16245Not AvailablePositive3533779 - 353452526776.5
prepilin peptidaseC9I36_16250Not AvailablePositive3534651 - 353549931553.2
membrane protein ypdkC9I36_16255Not AvailableNegative3535641 - 35357152909.8
llm class flavin-dependent oxidoreductaseC9I36_16260Not AvailableNegative3536123 - 353714837528.2
hypothetical proteinC9I36_16265Not AvailablePositive3537485 - 353854940056.2
abc transporter permeaseC9I36_16270Not AvailablePositive3538546 - 353956536252.8

Displaying genes 3191 – 3200 of 4270 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.