Pectobacterium punjabense str. SS95

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Pectobacterium

Description

Pectobacterium punjabense str. SS95 is a Gram-negative bacterium characterized by the presence of flagella, which facilitates motility. This organism possesses a single replicon, indicating a streamlined genetic structure. The genomic data for P. punjabense str. SS95 is available under the accession number PYSO00000000.1, contributing to its classification and further study within the microbial taxonomy. As a member of the Pectobacterium genus, P. punjabense is known to be involved in plant-pathogenic interactions, particularly affecting various crops. The motility conferred by its flagella may enhance its ability to colonize plant tissues and contribute to disease development. Understanding the genetic and physiological traits of P. punjabense str. SS95 can provide insights into its ecological role and its impact on agricultural systems, particularly in regions where it may pose a threat to crop health. This bacterium exemplifies the importance of studying microbial traits in understanding their ecological interactions and potential impacts on agriculture. The data associated with P. punjabense str. SS95 underscores the relevance of genomic resources in the ongoing research of plant pathogens and their management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusPectobacterium
SpeciesPectobacterium punjabense
StrainSS95

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pectobacterium punjabense strain SS95 FAU289, whole genome shotgun

Gene Summary

Adenine Count

1168290 bp

Thymine Count

1168741 bp

Guanine Count

1189553 bp

Cytosine Count

1205947 bp

Genome Length

4732531 bp

Protein-coding Genes

4173 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
efflux rnd transporter periplasmic adaptor subunitC9I36_15965Not AvailablePositive3465242 - 346604528809.2
hlyd family secretion proteinC9I36_15970Not AvailablePositive3466042 - 346736448623.0
peptidase m50C9I36_15975Not AvailablePositive3467361 - 346946980324.4
phage tail proteinC9I36_15980Not AvailablePositive3469954 - 347069424946.7
hypothetical proteinC9I36_15985Not AvailablePositive3470905 - 3477750231418.0
xre family transcriptional regulatorC9I36_15990Not AvailablePositive3477807 - 347868232106.2
udp-glucose 6-dehydrogenaseC9I36_15995Not AvailablePositive3479081 - 348024743833.6
udp-4-amino-4-deoxy-l-arabinose aminotransferaseC9I36_16000Not AvailablePositive3480485 - 348163342036.8
undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferaseC9I36_16005Not AvailablePositive3481626 - 348260936493.5
bifunctional udp-glucuronic acid oxidase/udp-4-amino-4-deoxy-l-arabinose formyltransferaseC9I36_16010Not AvailablePositive3482606 - 348462775282.7

Displaying genes 3141 – 3150 of 4270 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.