Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium punjabense |
| Strain | SS95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168290 bp
Thymine Count
1168741 bp
Guanine Count
1189553 bp
Cytosine Count
1205947 bp
Genome Length
4732531 bp
Protein-coding Genes
4173 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s1 | C9I36_13300 | Not Available | Negative | 2871691 - 2873364 | 61267.7 |
| (d)cmp kinase | C9I36_13305 | Not Available | Negative | 2873481 - 2874158 | 24484.4 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | C9I36_13310 | Not Available | Negative | 2874368 - 2875657 | 46679.3 |
| phosphoserine transaminase | C9I36_13315 | Not Available | Negative | 2875739 - 2876824 | 40141.9 |
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | C9I36_13320 | Not Available | Positive | 2877154 - 2878917 | 65746.9 |
| formate transporter foca | C9I36_13325 | Not Available | Positive | 2879357 - 2880217 | 30873.4 |
| formate c-acetyltransferase | C9I36_13330 | Not Available | Positive | 2880275 - 2882557 | 84923.2 |
| pyruvate formate lyase 1-activating protein | C9I36_13335 | Not Available | Positive | 2882826 - 2883566 | 28098.7 |
| hydantoinase subunit beta | C9I36_13340 | Not Available | Negative | 2883653 - 2885221 | 56046.2 |
| duf917 domain-containing protein | C9I36_13345 | Not Available | Negative | 2885232 - 2886341 | 39617.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
