Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium punjabense |
| Strain | SS95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168290 bp
Thymine Count
1168741 bp
Guanine Count
1189553 bp
Cytosine Count
1205947 bp
Genome Length
4732531 bp
Protein-coding Genes
4173 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion protein | C9I36_12600 | Not Available | Negative | 2720554 - 2720988 | 15749.0 |
| serine kinase | C9I36_12605 | Not Available | Negative | 2720975 - 2721199 | 8039.34 |
| hrpe/yscl family type iii secretion apparatus protein | C9I36_12610 | Not Available | Negative | 2721326 - 2721925 | 22383.9 |
| type iii secretion protein | C9I36_12615 | Not Available | Negative | 2721962 - 2722579 | 23250.1 |
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | C9I36_12620 | Not Available | Negative | 2722576 - 2723343 | 28026.4 |
| type iii secretion protein | C9I36_12625 | Not Available | Negative | 2723350 - 2723715 | 12926.0 |
| hypothetical protein | C9I36_12630 | Not Available | Negative | 2723783 - 2723989 | 6923.14 |
| diguanylate phosphodiesterase | C9I36_12635 | Not Available | Positive | 2724366 - 2725946 | 59064.5 |
| aaa family atpase | C9I36_12640 | Not Available | Negative | 2726012 - 2727031 | 37851.1 |
| dna-binding response regulator | C9I36_12645 | Not Available | Negative | 2727401 - 2728042 | 23550.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
