Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium punjabense |
| Strain | SS95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168290 bp
Thymine Count
1168741 bp
Guanine Count
1189553 bp
Cytosine Count
1205947 bp
Genome Length
4732531 bp
Protein-coding Genes
4173 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| expansin-yoaj | C9I36_12090 | Not Available | Positive | 2609253 - 2609942 | 25262.2 |
| hypothetical protein | C9I36_12095 | Not Available | Positive | 2610230 - 2611615 | 49521.6 |
| virulence factor srfb | C9I36_12100 | Not Available | Positive | 2611618 - 2614605 | 112487.0 |
| virulence factor | C9I36_12105 | Not Available | Positive | 2614602 - 2617064 | 92098.9 |
| nuclear transport factor 2 family protein | C9I36_12110 | Not Available | Positive | 2617322 - 2617801 | 18352.8 |
| short-chain dehydrogenase | C9I36_12115 | Not Available | Positive | 2617798 - 2618514 | 25592.2 |
| fad-dependent oxidoreductase | C9I36_12120 | Not Available | Positive | 2618519 - 2619793 | 48559.5 |
| duf1365 domain-containing protein | C9I36_12125 | Not Available | Positive | 2619786 - 2620511 | 28191.2 |
| sam-dependent methyltransferase | C9I36_12130 | Not Available | Positive | 2620508 - 2621737 | 47348.5 |
| sugar abc transporter substrate-binding protein | C9I36_12135 | Not Available | Negative | 2621816 - 2623135 | 48697.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
