Pectobacterium punjabense str. SS95

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Pectobacterium

Description

Pectobacterium punjabense str. SS95 is a Gram-negative bacterium characterized by the presence of flagella, which facilitates motility. This organism possesses a single replicon, indicating a streamlined genetic structure. The genomic data for P. punjabense str. SS95 is available under the accession number PYSO00000000.1, contributing to its classification and further study within the microbial taxonomy. As a member of the Pectobacterium genus, P. punjabense is known to be involved in plant-pathogenic interactions, particularly affecting various crops. The motility conferred by its flagella may enhance its ability to colonize plant tissues and contribute to disease development. Understanding the genetic and physiological traits of P. punjabense str. SS95 can provide insights into its ecological role and its impact on agricultural systems, particularly in regions where it may pose a threat to crop health. This bacterium exemplifies the importance of studying microbial traits in understanding their ecological interactions and potential impacts on agriculture. The data associated with P. punjabense str. SS95 underscores the relevance of genomic resources in the ongoing research of plant pathogens and their management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusPectobacterium
SpeciesPectobacterium punjabense
StrainSS95

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pectobacterium punjabense strain SS95 FAU289, whole genome shotgun

Gene Summary

Adenine Count

1168290 bp

Thymine Count

1168741 bp

Guanine Count

1189553 bp

Cytosine Count

1205947 bp

Genome Length

4732531 bp

Protein-coding Genes

4173 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thiamine/thiamine pyrophosphate abc transporter permease thipC9I36_10080Not AvailablePositive2186344 - 218795159575.8
thiamine abc transporter atp-binding proteinC9I36_10085Not AvailablePositive2187938 - 218864225810.4
xylan 1,4-beta-xylosidaseC9I36_10090Not AvailableNegative2188653 - 219027560287.3
ilvb operon leader peptide ivblC9I36_10095Not AvailablePositive2190563 - 21906703538.32
acetolactate synthase catalytic subunitC9I36_10100Not AvailablePositive2190766 - 219244559567.8
acetolactate synthase isozyme 1 small subunitC9I36_10105Not AvailablePositive2192451 - 219276211849.3
hypothetical proteinC9I36_10110Not AvailableNegative2192798 - 219356828532.9
sensor domain-containing diguanylate cyclaseC9I36_10115Not AvailablePositive2193716 - 219529659672.0
dna polymerase iiC9I36_10120Not AvailablePositive2195741 - 219810790554.4
rna polymerase-associated protein rapaC9I36_10125Not AvailablePositive2198269 - 2201172109897.0

Displaying genes 1991 – 2000 of 4270 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.