Pectobacterium punjabense str. SS95

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Pectobacterium

Description

Pectobacterium punjabense str. SS95 is a Gram-negative bacterium characterized by the presence of flagella, which facilitates motility. This organism possesses a single replicon, indicating a streamlined genetic structure. The genomic data for P. punjabense str. SS95 is available under the accession number PYSO00000000.1, contributing to its classification and further study within the microbial taxonomy. As a member of the Pectobacterium genus, P. punjabense is known to be involved in plant-pathogenic interactions, particularly affecting various crops. The motility conferred by its flagella may enhance its ability to colonize plant tissues and contribute to disease development. Understanding the genetic and physiological traits of P. punjabense str. SS95 can provide insights into its ecological role and its impact on agricultural systems, particularly in regions where it may pose a threat to crop health. This bacterium exemplifies the importance of studying microbial traits in understanding their ecological interactions and potential impacts on agriculture. The data associated with P. punjabense str. SS95 underscores the relevance of genomic resources in the ongoing research of plant pathogens and their management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusPectobacterium
SpeciesPectobacterium punjabense
StrainSS95

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pectobacterium punjabense strain SS95 FAU289, whole genome shotgun

Gene Summary

Adenine Count

1168290 bp

Thymine Count

1168741 bp

Guanine Count

1189553 bp

Cytosine Count

1205947 bp

Genome Length

4732531 bp

Protein-coding Genes

4173 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid abc transporter substrate-binding proteinC9I36_08805Not AvailablePositive1906214 - 190702329429.8
Trna-proNot AvailableNot AvailablePositive1907199 - 1907275Not Available
Trna-leuNot AvailableNot AvailablePositive1907319 - 1907405Not Available
Trna-hisNot AvailableNot AvailablePositive1907458 - 1907533Not Available
Trna-argNot AvailableNot AvailablePositive1907651 - 1907727Not Available
lipopolysaccharide n-acetylmannosaminouronosyltransferaseC9I36_08830Not AvailableNegative1907992 - 190874128263.2
o-antigen assembly polymeraseC9I36_08835Not AvailableNegative1908738 - 191012952785.8
tdp-n-acetylfucosamine:lipid ii n-acetylfucosaminyltransferaseC9I36_08840Not AvailableNegative1910126 - 191121141135.8
lipid iii flippase wzxeC9I36_08845Not AvailableNegative1911208 - 191245845129.7
dtdp-4-amino-4,6-dideoxygalactose transaminaseC9I36_08850Not AvailableNegative1912460 - 191359042153.6

Displaying genes 1741 – 1750 of 4270 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.