Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium punjabense |
| Strain | SS95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168290 bp
Thymine Count
1168741 bp
Guanine Count
1189553 bp
Cytosine Count
1205947 bp
Genome Length
4732531 bp
Protein-coding Genes
4173 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannonate dehydratase | C9I36_07750 | Not Available | Positive | 1669329 - 1670525 | 45023.4 |
| pectate lyase | C9I36_07755 | Not Available | Negative | 1670614 - 1671657 | 37270.8 |
| endopolygalacturonase | C9I36_07760 | Not Available | Positive | 1672235 - 1673443 | 42784.9 |
| secretion protein hlyd | C9I36_07765 | Not Available | Negative | 1673537 - 1674706 | 43369.2 |
| type i secretion system permease/atpase | C9I36_07770 | Not Available | Negative | 1674718 - 1676856 | 78632.5 |
| type i secretion system outer membrane protein | C9I36_07775 | Not Available | Negative | 1676896 - 1678308 | 51735.1 |
| multidrug abc transporter permease/atp-binding protein | C9I36_07785 | Not Available | Positive | 1693782 - 1695428 | 61654.3 |
| l-asparaginase | C9I36_07790 | Not Available | Positive | 1695634 - 1696674 | 36514.8 |
| shikimate kinase arol | C9I36_07795 | Not Available | Positive | 1696934 - 1697455 | 18872.6 |
| pyrimidine/purine nucleoside phosphorylase | C9I36_07800 | Not Available | Positive | 1697596 - 1697880 | 10191.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
