Kaistia algarum str. LYH11

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Kaistiaceae

Genus

Kaistia

Description

Kaistia algarum strain LYH11 is characterized by having a single replicon, which indicates a streamlined genomic organization typical of certain microbial species. The strain has been cataloged with the accession number PSNV00000000.1, providing a reference point for researchers interested in its genetic material and potential applications. The presence of only one replicon can suggest a simpler regulatory mechanism and potentially an efficient replication process, which may be advantageous for survival in various environments. As a member of the Kaistia genus, this strain is likely to inhabit marine ecosystems, aligning with the ecological niche often associated with this group of bacteria. Understanding the genomic structure of Kaistia algarum str. LYH11 may provide insights into its adaptability and ecological roles, particularly in the context of nutrient cycling and interactions within marine communities. The study of such strains can contribute to our knowledge of microbial diversity and function in oceanic environments, highlighting their potential importance in maintaining ecosystem health and resilience.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyKaistiaceae
GenusKaistia
SpeciesKaistia algarum
StrainLYH11

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Kaistia algarum strain LYH11 Pch-11_598, whole genome shotgun

Gene Summary

Adenine Count

1210388 bp

Thymine Count

1210063 bp

Guanine Count

1895759 bp

Cytosine Count

1898137 bp

Genome Length

6214553 bp

Protein-coding Genes

5886 genes

Non-Coding Genes

204 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
response regulatorC3941_31480Not AvailableNegative6196695 - 619707814185.0
zn-dependent hydrolaseC3941_31485Not AvailableNegative6197643 - 619849032538.9
transketolaseC3941_31490Not AvailablePositive6198688 - 619950029288.6
emra/emrk family multidrug efflux transporter periplasmic adaptor subunitC3941_31495Not AvailablePositive6199501 - 620015622912.9
mfs transporterC3941_31500Not AvailablePositive6200163 - 620051012275.3
aldehyde dehydrogenaseC3941_31510Not AvailablePositive6201795 - 620252327388.3
phosphate acetyltransferaseC3941_31520Not AvailableNegative6203196 - 620352911695.9
hypothetical proteinC3941_31530Not AvailablePositive6204092 - 620453416316.8
homoserine kinaseC3941_31535Not AvailablePositive6204535 - 62047678678.64
duf1294 domain-containing proteinC3941_31540Not AvailablePositive6204781 - 620541024140.5

Displaying genes 6071 – 6080 of 6090 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.