Kaistia algarum str. LYH11

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Kaistiaceae

Genus

Kaistia

Description

Kaistia algarum strain LYH11 is characterized by having a single replicon, which indicates a streamlined genomic organization typical of certain microbial species. The strain has been cataloged with the accession number PSNV00000000.1, providing a reference point for researchers interested in its genetic material and potential applications. The presence of only one replicon can suggest a simpler regulatory mechanism and potentially an efficient replication process, which may be advantageous for survival in various environments. As a member of the Kaistia genus, this strain is likely to inhabit marine ecosystems, aligning with the ecological niche often associated with this group of bacteria. Understanding the genomic structure of Kaistia algarum str. LYH11 may provide insights into its adaptability and ecological roles, particularly in the context of nutrient cycling and interactions within marine communities. The study of such strains can contribute to our knowledge of microbial diversity and function in oceanic environments, highlighting their potential importance in maintaining ecosystem health and resilience.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyKaistiaceae
GenusKaistia
SpeciesKaistia algarum
StrainLYH11

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Kaistia algarum strain LYH11 Pch-11_598, whole genome shotgun

Gene Summary

Adenine Count

1210388 bp

Thymine Count

1210063 bp

Guanine Count

1895759 bp

Cytosine Count

1898137 bp

Genome Length

6214553 bp

Protein-coding Genes

5886 genes

Non-Coding Genes

204 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l29C3941_27445Not AvailableNegative5632161 - 56323587395.05
50s ribosomal protein l16C3941_27450Not AvailableNegative5632358 - 563277115404.2
30s ribosomal protein s3C3941_27455Not AvailableNegative5632775 - 56330219111.85
single-stranded-dna-specific exonuclease recjC3941_27460Not AvailableNegative5633022 - 563434948272.4
pyridoxamine 5'-phosphate oxidaseC3941_27465Not AvailableNegative5634350 - 563500625749.2
hypothetical proteinC3941_27470Not AvailableNegative5635060 - 563545414192.3
rnd transporterC3941_27475Not AvailableNegative5635673 - 563667436044.8
rnd transporterC3941_27480Not AvailableNegative5636929 - 56370956305.65
hypothetical proteinC3941_27485Not AvailablePositive5637395 - 563786817902.9
glutathionylspermidine synthase family proteinC3941_27490Not AvailableNegative5638250 - 563912634004.2

Displaying genes 5411 – 5420 of 6090 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.