Kaistia algarum str. LYH11

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Kaistiaceae

Genus

Kaistia

Description

Kaistia algarum strain LYH11 is characterized by having a single replicon, which indicates a streamlined genomic organization typical of certain microbial species. The strain has been cataloged with the accession number PSNV00000000.1, providing a reference point for researchers interested in its genetic material and potential applications. The presence of only one replicon can suggest a simpler regulatory mechanism and potentially an efficient replication process, which may be advantageous for survival in various environments. As a member of the Kaistia genus, this strain is likely to inhabit marine ecosystems, aligning with the ecological niche often associated with this group of bacteria. Understanding the genomic structure of Kaistia algarum str. LYH11 may provide insights into its adaptability and ecological roles, particularly in the context of nutrient cycling and interactions within marine communities. The study of such strains can contribute to our knowledge of microbial diversity and function in oceanic environments, highlighting their potential importance in maintaining ecosystem health and resilience.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyKaistiaceae
GenusKaistia
SpeciesKaistia algarum
StrainLYH11

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Kaistia algarum strain LYH11 Pch-11_598, whole genome shotgun

Gene Summary

Adenine Count

1210388 bp

Thymine Count

1210063 bp

Guanine Count

1895759 bp

Cytosine Count

1898137 bp

Genome Length

6214553 bp

Protein-coding Genes

5886 genes

Non-Coding Genes

204 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
heme-degrading domain-containing proteinC3941_24850Not AvailablePositive5169427 - 516993618357.7
rna polymerase factor sigma-32C3941_24855Not AvailableNegative5170000 - 517086632517.6
card family transcriptional regulatorC3941_24860Not AvailableNegative5171139 - 517174422547.8
ferredoxinC3941_24865Not AvailableNegative5172174 - 517251212533.7
rna-binding proteinC3941_24870Not AvailableNegative5172629 - 517304815652.6
helicaseC3941_24875Not AvailableNegative5173081 - 5176392119997.0
duf3108 domain-containing proteinC3941_24880Not AvailableNegative5177140 - 517767719445.8
phosphoglucomutase, alpha-d-glucose phosphate-specificC3941_24885Not AvailableNegative5178231 - 517988658592.6
rna polymerase subunit sigmaC3941_24890Not AvailablePositive5180114 - 518066520605.6
fis family transcriptional regulatorC3941_24895Not AvailablePositive5180649 - 518142527557.0

Displaying genes 4921 – 4930 of 6090 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.