Kaistia algarum str. LYH11

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Kaistiaceae

Genus

Kaistia

Description

Kaistia algarum strain LYH11 is characterized by having a single replicon, which indicates a streamlined genomic organization typical of certain microbial species. The strain has been cataloged with the accession number PSNV00000000.1, providing a reference point for researchers interested in its genetic material and potential applications. The presence of only one replicon can suggest a simpler regulatory mechanism and potentially an efficient replication process, which may be advantageous for survival in various environments. As a member of the Kaistia genus, this strain is likely to inhabit marine ecosystems, aligning with the ecological niche often associated with this group of bacteria. Understanding the genomic structure of Kaistia algarum str. LYH11 may provide insights into its adaptability and ecological roles, particularly in the context of nutrient cycling and interactions within marine communities. The study of such strains can contribute to our knowledge of microbial diversity and function in oceanic environments, highlighting their potential importance in maintaining ecosystem health and resilience.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyKaistiaceae
GenusKaistia
SpeciesKaistia algarum
StrainLYH11

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Kaistia algarum strain LYH11 Pch-11_598, whole genome shotgun

Gene Summary

Adenine Count

1210388 bp

Thymine Count

1210063 bp

Guanine Count

1895759 bp

Cytosine Count

1898137 bp

Genome Length

6214553 bp

Protein-coding Genes

5886 genes

Non-Coding Genes

204 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf817 domain-containing proteinC3941_22525Not AvailableNegative4721702 - 472259533510.4
lysine transporter lyseC3941_22530Not AvailableNegative4722592 - 472321521451.9
dna replication/repair protein recfC3941_22535Not AvailableNegative4723221 - 472434540191.0
dna polymerase iii subunit betaC3941_22540Not AvailableNegative4724378 - 472549940708.7
chromosomal replication initiator protein dnaaC3941_22545Not AvailableNegative4725743 - 472725755766.0
sulfurtransferaseC3941_22550Not AvailableNegative4727285 - 472773115870.6
30s ribosomal protein s20C3941_22555Not AvailableNegative4728380 - 47286469458.62
enoyl-coa hydrataseC3941_22560Not AvailableNegative4728795 - 472956827162.9
dna-formamidopyrimidine glycosylaseC3941_22565Not AvailableNegative4729630 - 473049331751.0
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubieC3941_22570Not AvailablePositive4730597 - 473137328878.5

Displaying genes 4481 – 4490 of 6090 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.