Kaistia algarum str. LYH11

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Kaistiaceae

Genus

Kaistia

Description

Kaistia algarum strain LYH11 is characterized by having a single replicon, which indicates a streamlined genomic organization typical of certain microbial species. The strain has been cataloged with the accession number PSNV00000000.1, providing a reference point for researchers interested in its genetic material and potential applications. The presence of only one replicon can suggest a simpler regulatory mechanism and potentially an efficient replication process, which may be advantageous for survival in various environments. As a member of the Kaistia genus, this strain is likely to inhabit marine ecosystems, aligning with the ecological niche often associated with this group of bacteria. Understanding the genomic structure of Kaistia algarum str. LYH11 may provide insights into its adaptability and ecological roles, particularly in the context of nutrient cycling and interactions within marine communities. The study of such strains can contribute to our knowledge of microbial diversity and function in oceanic environments, highlighting their potential importance in maintaining ecosystem health and resilience.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyKaistiaceae
GenusKaistia
SpeciesKaistia algarum
StrainLYH11

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Kaistia algarum strain LYH11 Pch-11_598, whole genome shotgun

Gene Summary

Adenine Count

1210388 bp

Thymine Count

1210063 bp

Guanine Count

1895759 bp

Cytosine Count

1898137 bp

Genome Length

6214553 bp

Protein-coding Genes

5886 genes

Non-Coding Genes

204 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rhamnose abc transporter substrate-binding proteinC3941_16655Not AvailableNegative3538224 - 353934239625.0
branched-chain amino acid abc transporter permeaseC3941_16660Not AvailableNegative3539260 - 354026435518.7
abc transporter permeaseC3941_16665Not AvailableNegative3540261 - 354124734295.8
d-xylose abc transporter atp-binding proteinC3941_16670Not AvailableNegative3541244 - 354278254817.7
stress-induced proteinC3941_16675Not AvailableNegative3543314 - 35435177172.94
50s ribosomal protein l36C3941_16680Not AvailablePositive3543737 - 35438624892.19
hypothetical proteinC3941_16685Not AvailablePositive3543921 - 354454122154.4
hypothetical proteinC3941_16695Not AvailableNegative3546023 - 354648417120.2
n-formylglutamate amidohydrolaseC3941_16700Not AvailablePositive3546786 - 354760729535.0
duf1244 domain-containing proteinC3941_16705Not AvailablePositive3547683 - 354799411515.5

Displaying genes 3391 – 3400 of 6090 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.