Pseudomonas sp. SWI36

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. SWI36 is characterized by having a single replicon in its genomic structure, which is significant for its genetic stability and replication processes. The complete genomic sequence of this strain is accessible under the accession number NZ_CP026675.1. Pseudomonas species are known for their metabolic versatility and ability to adapt to various environmental conditions. This adaptability often allows them to thrive in diverse ecological niches, including soil, water, and even within plant and animal hosts. Their capacity to degrade a wide range of organic compounds makes them particularly important in bioremediation, where they can help mitigate pollution by breaking down hazardous substances. In summary, the genomic stability indicated by the presence of a single replicon, alongside the well-documented ecological versatility of the Pseudomonas genus, suggests that Pseudomonas sp. SWI36 may play a significant role in its environment. Its potential for bioremediation and adaptation underscores the ecological importance of this strain within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. SWI36
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. SWI36
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. SWI36 chromosome, complete genome.

Gene Summary

Adenine Count

1175403 bp

Thymine Count

1180188 bp

Guanine Count

1908623 bp

Cytosine Count

1908042 bp

Genome Length

6172256 bp

Protein-coding Genes

5458 genes

Non-Coding Genes

167 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
redox-sensitive transcriptional activator soxrC4Q27_RS20300Not AvailableNegative4240749 - 424120416634.1
efflux rnd transporter periplasmic adaptor subunitC4Q27_RS20305Not AvailablePositive4241289 - 424238638350.0
mexw/mexi family multidrug efflux rnd transporter permease subunitC4Q27_RS20310Not AvailablePositive4242383 - 4245466110222.0
gntr family transcriptional regulatorC4Q27_RS20315Not AvailableNegative4245520 - 424625727232.4
dha2 family efflux mfs transporter permease subunitC4Q27_RS20320Not AvailableNegative4246339 - 424785354115.4
hlyd family secretion proteinC4Q27_RS20325Not AvailableNegative4247843 - 424898841222.7
efflux transporter outer membrane subunitC4Q27_RS20335Not AvailableNegative4249195 - 425061351420.4
arac family transcriptional regulatorC4Q27_RS20340Not AvailableNegative4250717 - 425142726131.6
cupin domain-containing proteinC4Q27_RS20345Not AvailableNegative4251597 - 425198314418.2
arac family transcriptional regulatorC4Q27_RS20350Not AvailableNegative4252092 - 425291630869.0

Displaying genes 3881 – 3890 of 5625 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.