Pseudomonas sp. SWI36

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. SWI36 is characterized by having a single replicon in its genomic structure, which is significant for its genetic stability and replication processes. The complete genomic sequence of this strain is accessible under the accession number NZ_CP026675.1. Pseudomonas species are known for their metabolic versatility and ability to adapt to various environmental conditions. This adaptability often allows them to thrive in diverse ecological niches, including soil, water, and even within plant and animal hosts. Their capacity to degrade a wide range of organic compounds makes them particularly important in bioremediation, where they can help mitigate pollution by breaking down hazardous substances. In summary, the genomic stability indicated by the presence of a single replicon, alongside the well-documented ecological versatility of the Pseudomonas genus, suggests that Pseudomonas sp. SWI36 may play a significant role in its environment. Its potential for bioremediation and adaptation underscores the ecological importance of this strain within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. SWI36
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. SWI36
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. SWI36 chromosome, complete genome.

Gene Summary

Adenine Count

1175403 bp

Thymine Count

1180188 bp

Guanine Count

1908623 bp

Cytosine Count

1908042 bp

Genome Length

6172256 bp

Protein-coding Genes

5458 genes

Non-Coding Genes

167 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysr substrate-binding domain-containing proteinC4Q27_RS17915Not AvailableNegative3750876 - 375177233525.3
s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenaseC4Q27_RS17920Not AvailablePositive3751880 - 375299239235.6
s-formylglutathione hydrolaseC4Q27_RS17925Not AvailablePositive3753001 - 375385531687.5
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseC4Q27_RS17930Not AvailablePositive3753968 - 375444116845.4
trna pseudouridine(13) synthase trudC4Q27_RS17935Not AvailablePositive3754438 - 375549638455.8
5'/3'-nucleotidase sureC4Q27_RS17940Not AvailablePositive3755484 - 375623326318.5
protein-l-isoaspartate(d-aspartate) o-methyltransferaseC4Q27_RS17945Not AvailablePositive3756269 - 375690723470.7
peptidoglycan dd-metalloendopeptidase family proteinC4Q27_RS17950Not AvailablePositive3757145 - 375800230000.8
rna polymerase sigma factor rposC4Q27_RS17955Not AvailablePositive3758111 - 375911838177.6
ferredoxin fdxaC4Q27_RS17960Not AvailableNegative3759654 - 375997712048.1

Displaying genes 3441 – 3450 of 5625 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.