Pseudomonas sp. SWI36

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. SWI36 is characterized by having a single replicon in its genomic structure, which is significant for its genetic stability and replication processes. The complete genomic sequence of this strain is accessible under the accession number NZ_CP026675.1. Pseudomonas species are known for their metabolic versatility and ability to adapt to various environmental conditions. This adaptability often allows them to thrive in diverse ecological niches, including soil, water, and even within plant and animal hosts. Their capacity to degrade a wide range of organic compounds makes them particularly important in bioremediation, where they can help mitigate pollution by breaking down hazardous substances. In summary, the genomic stability indicated by the presence of a single replicon, alongside the well-documented ecological versatility of the Pseudomonas genus, suggests that Pseudomonas sp. SWI36 may play a significant role in its environment. Its potential for bioremediation and adaptation underscores the ecological importance of this strain within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. SWI36
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. SWI36
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. SWI36 chromosome, complete genome.

Gene Summary

Adenine Count

1175403 bp

Thymine Count

1180188 bp

Guanine Count

1908623 bp

Cytosine Count

1908042 bp

Genome Length

6172256 bp

Protein-coding Genes

5458 genes

Non-Coding Genes

167 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gamma-glutamyltransferaseC4Q27_RS15995Not AvailablePositive3349010 - 335067759838.6
methyl-accepting chemotaxis proteinC4Q27_RS16000Not AvailableNegative3350817 - 335278470706.7
neutral zinc metallopeptidaseC4Q27_RS16005Not AvailableNegative3352908 - 335379231735.4
protocatechuate 3,4-dioxygenase subunit betaC4Q27_RS16010Not AvailablePositive3353993 - 335471226837.1
protocatechuate 3,4-dioxygenase subunit alphaC4Q27_RS16015Not AvailablePositive3354723 - 335532822335.2
trna (uridine(54)-c5)-methyltransferase trmaC4Q27_RS16020Not AvailableNegative3355466 - 335655140880.8
ncs2 family permeaseC4Q27_RS16025Not AvailableNegative3356548 - 335784344769.1
mfs transporterC4Q27_RS16030Not AvailableNegative3358073 - 335929343087.3
cytochrome ubiquinol oxidase subunit iC4Q27_RS16035Not AvailablePositive3359637 - 336107353019.9
cytochrome d ubiquinol oxidase subunit iiC4Q27_RS16040Not AvailablePositive3361077 - 336208437584.2

Displaying genes 3071 – 3080 of 5625 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.