Microvirga sp. 17 mud 1-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Methylobacteriaceae

Genus

Microvirga

Description

Microvirga sp. 17 mud 1-3 is characterized by its single replicon, indicating a streamlined genomic organization. The organism has been cataloged under the accession number NZ_CP029481.1, which provides a reference for its genetic material. As a member of the Microvirga genus, this bacterium is likely to exhibit traits common to its relatives, such as being capable of nitrogen fixation, which plays a crucial role in soil fertility and ecosystem functioning. However, specific metabolic capabilities or ecological roles for Microvirga sp. 17 mud 1-3 are not detailed in the available data. The single replicon may suggest a relatively simple genetic architecture, which can be advantageous for rapid adaptation to environmental changes. This trait may allow Microvirga sp. 17 mud 1-3 to thrive in its ecological niche, potentially contributing to nutrient cycling within its environment. In summary, Microvirga sp. 17 mud 1-3, noted for its single replicon and documented under accession NZ_CP029481.1, may play an important role in soil ecosystems, particularly through processes such as nitrogen fixation, although specific ecological roles remain to be fully elucidated. The simplicity of its genomic organization could facilitate adaptation and survival in varying environmental conditions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyMethylobacteriaceae
GenusMicrovirga
SpeciesMicrovirga sp. 17 mud 1-3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microvirga sp. 17 mud 1-3 chromosome, complete genome.

Gene Summary

Adenine Count

792804 bp

Thymine Count

791760 bp

Guanine Count

1409642 bp

Cytosine Count

1408901 bp

Genome Length

4403107 bp

Protein-coding Genes

4016 genes

Non-Coding Genes

144 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glucose-1-phosphate thymidylyltransferase rfbaC4E04_RS13615Not AvailableNegative2857020 - 285788931729.1
dtdp-4-dehydrorhamnose reductaseC4E04_RS13620Not AvailableNegative2857886 - 285879431907.9
dtdp-4-dehydrorhamnose 3,5-epimeraseC4E04_RS13625Not AvailableNegative2858809 - 285934819533.2
dtdp-glucose 4,6-dehydrataseC4E04_RS13630Not AvailableNegative2859428 - 286048639983.4
degt/dnrj/eryc1/strs family aminotransferaseC4E04_RS13635Not AvailableNegative2860730 - 286188441325.7
gfo/idh/moca family oxidoreductaseC4E04_RS21635Not AvailableNegative2861884 - 286348857763.6
nucleotide sugar dehydrogenaseC4E04_RS13645Not AvailableNegative2863542 - 286490648907.0
non-hydrolyzing udp-n-acetylglucosamine 2-epimeraseC4E04_RS13650Not AvailablePositive2865208 - 286624838331.1
fg-gap repeat domain-containing proteinC4E04_RS13655Not AvailableNegative2866320 - 286908597969.7
glycosyltransferase family 4 proteinC4E04_RS13660Not AvailableNegative2869627 - 287211993135.4

Displaying genes 2771 – 2780 of 4160 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.