Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1H1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
664956 bp
Thymine Count
661191 bp
Guanine Count
1429804 bp
Cytosine Count
1446370 bp
Genome Length
4202523 bp
Protein-coding Genes
3778 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioesterase | C5E05_02955 | Not Available | Negative | 610750 - 611196 | 15348.5 |
| dna polymerase i | C5E05_02960 | Not Available | Positive | 611301 - 613931 | 96765.6 |
| duf885 domain-containing protein | C5E05_02965 | Not Available | Positive | 614026 - 615723 | 63065.8 |
| transcriptional regulator | C5E05_02970 | Not Available | Positive | 615842 - 617161 | 46183.2 |
| aldehyde dehydrogenase | C5E05_02975 | Not Available | Positive | 617262 - 618785 | 55592.8 |
| tetr family transcriptional regulator | C5E05_02980 | Not Available | Negative | 618851 - 619489 | 24294.9 |
| 4-hydroxyphenylpyruvate dioxygenase | C5E05_02985 | Not Available | Negative | 619455 - 621287 | 67170.2 |
| shikimate dehydrogenase | C5E05_02990 | Not Available | Positive | 621415 - 622326 | 32305.9 |
| mfs transporter | C5E05_02995 | Not Available | Positive | 622323 - 623624 | 46513.4 |
| duf779 domain-containing protein | C5E05_03000 | Not Available | Positive | 623751 - 624212 | 16596.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
