Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1H1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
664956 bp
Thymine Count
661191 bp
Guanine Count
1429804 bp
Cytosine Count
1446370 bp
Genome Length
4202523 bp
Protein-coding Genes
3778 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate synthase | C5E05_02705 | Not Available | Positive | 554253 - 555524 | 44763.5 |
| shikimate kinase | C5E05_02710 | Not Available | Positive | 555521 - 556036 | 18751.4 |
| 3-dehydroquinate synthase | C5E05_02715 | Not Available | Positive | 555933 - 557111 | 42201.9 |
| hypothetical protein | C5E05_02720 | Not Available | Negative | 557130 - 558059 | 32737.8 |
| cof-type had-iib family hydrolase | C5E05_02725 | Not Available | Positive | 558087 - 558989 | 31858.5 |
| type ii 3-dehydroquinate dehydratase | C5E05_02730 | Not Available | Positive | 559013 - 559480 | 16652.9 |
| elongation factor p | C5E05_02735 | Not Available | Positive | 559597 - 560160 | 20677.6 |
| transcription antitermination factor nusb | C5E05_02740 | Not Available | Positive | 560160 - 560567 | 14971.7 |
| bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrr | C5E05_02745 | Not Available | Positive | 560733 - 561296 | 20085.2 |
| aspartate carbamoyltransferase | C5E05_02750 | Not Available | Positive | 561293 - 562252 | 34298.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
