Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1H1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
664956 bp
Thymine Count
661191 bp
Guanine Count
1429804 bp
Cytosine Count
1446370 bp
Genome Length
4202523 bp
Protein-coding Genes
3778 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf349 domain-containing protein | C5E05_02655 | Not Available | Negative | 543723 - 544955 | 45863.4 |
| peptidylprolyl isomerase | C5E05_02660 | Not Available | Negative | 545092 - 545871 | 26768.2 |
| aaa family atpase | C5E05_02665 | Not Available | Positive | 545941 - 547266 | 47302.2 |
| 30s ribosomal protein s4 | C5E05_02670 | Not Available | Positive | 547465 - 548094 | 23684.0 |
| duf948 domain-containing protein | C5E05_02675 | Not Available | Positive | 548292 - 548717 | 14375.6 |
| hypothetical protein | C5E05_02680 | Not Available | Positive | 548756 - 548950 | 6665.97 |
| alanine--trna ligase | C5E05_02685 | Not Available | Positive | 549023 - 551692 | 95467.9 |
| holliday junction resolvase ruvx | C5E05_02690 | Not Available | Positive | 551685 - 552191 | 17905.2 |
| endolytic transglycosylase mltg | C5E05_02695 | Not Available | Positive | 552067 - 553389 | 47140.0 |
| shikimate dehydrogenase | C5E05_02700 | Not Available | Positive | 553382 - 554248 | 29976.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
