Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1H1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
664956 bp
Thymine Count
661191 bp
Guanine Count
1429804 bp
Cytosine Count
1446370 bp
Genome Length
4202523 bp
Protein-coding Genes
3778 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase | C5E05_03105 | Not Available | Negative | 648160 - 650250 | 74719.5 |
| protoheme ix farnesyltransferase | C5E05_03110 | Not Available | Positive | 650470 - 651396 | 33669.1 |
| heme a synthase | C5E05_03115 | Not Available | Negative | 652008 - 652973 | 33875.6 |
| fe-s cluster assembly protein sufb | C5E05_03120 | Not Available | Positive | 653236 - 654654 | 52697.4 |
| fe-s cluster assembly protein sufd | C5E05_03125 | Not Available | Positive | 654655 - 655860 | 43608.9 |
| non-heme iron oxygenase ferredoxin subunit | C5E05_03130 | Not Available | Positive | 655857 - 656189 | 12206.3 |
| fe-s cluster assembly atpase sufc | C5E05_03135 | Not Available | Positive | 656193 - 656957 | 27736.3 |
| hypothetical protein | C5E05_03140 | Not Available | Positive | 656967 - 657299 | 12248.5 |
| abc transporter | C5E05_03145 | Not Available | Positive | 657480 - 659078 | 57957.6 |
| surf1 family protein | C5E05_03150 | Not Available | Negative | 659174 - 660028 | 31878.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
