Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1H1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
664956 bp
Thymine Count
661191 bp
Guanine Count
1429804 bp
Cytosine Count
1446370 bp
Genome Length
4202523 bp
Protein-coding Genes
3778 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol dehydrogenase | C5E05_02355 | Not Available | Positive | 480880 - 482031 | 40138.5 |
| 3-hydroxyacyl-coa dehydrogenase | C5E05_02360 | Not Available | Negative | 482108 - 484249 | 76572.3 |
| acetyl-coa c-acyltransferase | C5E05_02365 | Not Available | Negative | 484255 - 485496 | 43883.4 |
| ribonuclease d | C5E05_02370 | Not Available | Negative | 485557 - 486783 | 45458.0 |
| duf3000 domain-containing protein | C5E05_02375 | Not Available | Negative | 486773 - 487378 | 21557.2 |
| alpha/beta hydrolase | C5E05_02380 | Not Available | Positive | 487483 - 488664 | 42925.8 |
| cysteine desulfuration protein sufe | C5E05_02385 | Not Available | Negative | 488661 - 489104 | 15873.2 |
| cell division protein zape | C5E05_02390 | Not Available | Positive | 489274 - 490260 | 35375.0 |
| ammonia channel protein | C5E05_02395 | Not Available | Positive | 490466 - 491698 | 42553.3 |
| duf456 domain-containing protein | C5E05_02400 | Not Available | Positive | 491821 - 492321 | 17373.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
