Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1H1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
664956 bp
Thymine Count
661191 bp
Guanine Count
1429804 bp
Cytosine Count
1446370 bp
Genome Length
4202523 bp
Protein-coding Genes
3778 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | C5E05_18760 | Not Available | Positive | 3999777 - 4000451 | 24776.2 |
| nad(p)/fad-dependent oxidoreductase | C5E05_18765 | Not Available | Negative | 4000448 - 4001386 | 33158.7 |
| xre family transcriptional regulator | C5E05_18770 | Not Available | Positive | 4001445 - 4002086 | 23329.5 |
| haloacid dehalogenase | C5E05_18775 | Not Available | Positive | 4002253 - 4003029 | 27435.1 |
| family 65 glycosyl hydrolase | C5E05_18780 | Not Available | Positive | 4003026 - 4005527 | 93629.7 |
| hypothetical protein | C5E05_18785 | Not Available | Negative | 4006469 - 4007311 | 31370.0 |
| glycine betaine abc transporter atp-binding protein | C5E05_18790 | Not Available | Positive | 4007773 - 4009041 | 45132.4 |
| glycine/betaine abc transporter permease | C5E05_18795 | Not Available | Positive | 4009038 - 4010015 | 34227.8 |
| glycine/betaine abc transporter substrate-binding protein | C5E05_18800 | Not Available | Positive | 4010059 - 4010955 | 32379.1 |
| haloacid dehalogenase | C5E05_18805 | Not Available | Negative | 4011076 - 4011747 | 24218.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
