Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1H1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
664956 bp
Thymine Count
661191 bp
Guanine Count
1429804 bp
Cytosine Count
1446370 bp
Genome Length
4202523 bp
Protein-coding Genes
3778 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydrogenase | C5E05_18660 | Not Available | Positive | 3975178 - 3976260 | 37791.9 |
| branched chain amino acid aminotransferase | C5E05_18665 | Not Available | Positive | 3976257 - 3977402 | 41564.2 |
| hypothetical protein | C5E05_18670 | Not Available | Positive | 3977454 - 3977864 | 14538.2 |
| hypothetical protein | C5E05_18675 | Not Available | Negative | 3977861 - 3978373 | 19296.8 |
| pucr family transcriptional regulator | C5E05_18680 | Not Available | Negative | 3978419 - 3979864 | 51168.2 |
| 4-aminobutyrate--2-oxoglutarate transaminase | C5E05_18685 | Not Available | Positive | 3980003 - 3981352 | 46796.1 |
| sulfite exporter taue/safe family protein | C5E05_18690 | Not Available | Negative | 3981637 - 3982449 | 27751.2 |
| zn-dependent hydrolase | C5E05_18695 | Not Available | Negative | 3982457 - 3983815 | 48528.4 |
| aminotransferase | C5E05_18700 | Not Available | Negative | 3983812 - 3985068 | 44591.5 |
| duf3225 domain-containing protein | C5E05_18705 | Not Available | Negative | 3985080 - 3986681 | 55824.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
