Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1H1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
664956 bp
Thymine Count
661191 bp
Guanine Count
1429804 bp
Cytosine Count
1446370 bp
Genome Length
4202523 bp
Protein-coding Genes
3778 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytr family transcriptional regulator | C5E05_17905 | Not Available | Positive | 3815022 - 3816509 | 52259.2 |
| abc transporter atp-binding protein | C5E05_17910 | Not Available | Negative | 3816696 - 3817502 | 28706.7 |
| abc transporter atp-binding protein | C5E05_17915 | Not Available | Negative | 3817499 - 3818488 | 35718.8 |
| branched-chain amino acid abc transporter permease | C5E05_17920 | Not Available | Negative | 3818511 - 3819491 | 34907.4 |
| branched-chain amino acid abc transporter permease | C5E05_17925 | Not Available | Negative | 3819502 - 3820779 | 44682.9 |
| hypothetical protein | C5E05_17930 | Not Available | Negative | 3821154 - 3822086 | 33943.0 |
| 3-methyladenine dna glycosylase | C5E05_17935 | Not Available | Positive | 3822148 - 3823080 | 34521.9 |
| heat-shock protein hsp20 | C5E05_17940 | Not Available | Positive | 3823277 - 3823690 | 15290.0 |
| xylulose kinase | C5E05_17945 | Not Available | Negative | 3823830 - 3825269 | 49256.1 |
| xylose isomerase | C5E05_17950 | Not Available | Negative | 3825425 - 3826618 | 43550.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
