Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1H1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
664956 bp
Thymine Count
661191 bp
Guanine Count
1429804 bp
Cytosine Count
1446370 bp
Genome Length
4202523 bp
Protein-coding Genes
3778 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5E05_17855 | Not Available | Negative | 3804334 - 3805842 | 51778.0 |
| tripartite tricarboxylate transporter tctb family protein | C5E05_17860 | Not Available | Negative | 3805839 - 3806360 | 18087.6 |
| tripartite tricarboxylate transporter substrate binding protein | C5E05_17865 | Not Available | Negative | 3806365 - 3807342 | 32762.2 |
| siderophore-interacting protein | C5E05_17870 | Not Available | Positive | 3807502 - 3808446 | 34722.6 |
| iron abc transporter permease | C5E05_17875 | Not Available | Positive | 3808443 - 3809456 | 33663.4 |
| abc transporter permease | C5E05_17880 | Not Available | Positive | 3809525 - 3810523 | 33642.5 |
| cobalamin/fe(3+)-siderophore abc transporter atp-binding protein | C5E05_17885 | Not Available | Positive | 3810520 - 3811386 | 30625.9 |
| iron abc transporter substrate-binding protein | C5E05_17890 | Not Available | Positive | 3811437 - 3812465 | 35783.6 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | C5E05_17895 | Not Available | Negative | 3812571 - 3813341 | 27652.0 |
| amino acid transporter | C5E05_17900 | Not Available | Negative | 3813386 - 3815005 | 57213.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
