Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1H1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
664956 bp
Thymine Count
661191 bp
Guanine Count
1429804 bp
Cytosine Count
1446370 bp
Genome Length
4202523 bp
Protein-coding Genes
3778 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short chain dehydrogenase | C5E05_17400 | Not Available | Negative | 3708969 - 3709703 | 26231.1 |
| hypothetical protein | C5E05_17405 | Not Available | Positive | 3710263 - 3710667 | 15119.5 |
| hypothetical protein | C5E05_17410 | Not Available | Negative | 3710729 - 3712270 | 52307.1 |
| pyridoxal kinase | C5E05_17415 | Not Available | Positive | 3712455 - 3713306 | 30458.2 |
| peptidase m38 | C5E05_17420 | Not Available | Negative | 3713454 - 3714662 | 43507.3 |
| hypothetical protein | C5E05_17425 | Not Available | Negative | 3714659 - 3715168 | 17813.8 |
| mfs transporter | C5E05_17430 | Not Available | Negative | 3715165 - 3716565 | 50867.2 |
| rpir family transcriptional regulator | C5E05_17435 | Not Available | Positive | 3716737 - 3717633 | 31828.9 |
| hypothetical protein | C5E05_17440 | Not Available | Positive | 3717719 - 3718453 | 24436.5 |
| polyketide cyclase | C5E05_17445 | Not Available | Negative | 3718457 - 3718828 | 13624.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
