Pseudoclavibacter sp. AY1H1

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Pseudoclavibacter

Description

Pseudoclavibacter sp. AY1H1 is a notable bacterium characterized by its single replicon structure, indicating a streamlined genomic organization. The genomic sequence of this organism is cataloged under the accession number PSXX00000000.1, which provides a reference point for studies pertaining to its genetic makeup. The classification of Pseudoclavibacter sp. suggests a relationship with other members of the Actinobacteria phylum, known for their diverse metabolic capabilities and ecological roles. Although specific traits regarding its metabolic pathways or ecological interactions are not provided, members of this genus typically participate in soil and plant-associated environments, which could imply potential interactions with plant systems or contributions to soil health. In summary, Pseudoclavibacter sp. AY1H1 is distinguished by its singular replicon and accession number PSXX00000000.1. While further details about its ecological roles remain unspecified, the characteristics of the Pseudoclavibacter genus suggest potential significance in environmental microbiology, particularly in soil ecosystems. This highlights the importance of studying such organisms to better understand their contributions to biogeochemical cycles and plant health.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusPseudoclavibacter
SpeciesPseudoclavibacter sp. AY1H1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoclavibacter sp. AY1H1


Gene Summary

Adenine Count

664956 bp

Thymine Count

661191 bp

Guanine Count

1429804 bp

Cytosine Count

1446370 bp

Genome Length

4202523 bp

Protein-coding Genes

3778 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phytoene synthaseC5E05_16360Not AvailablePositive3476077 - 347694631529.9
phytoene desaturaseC5E05_16365Not AvailablePositive3476943 - 347851156842.7
monooxygenaseC5E05_16370Not AvailablePositive3478508 - 347920024545.3
carotenoid biosynthesis proteinC5E05_16375Not AvailablePositive3479286 - 348012529632.5
phytoene desaturaseC5E05_16380Not AvailablePositive3480122 - 348164854240.1
duf1844 domain-containing proteinC5E05_16385Not AvailableNegative3481735 - 348210913048.2
translation initiation factor if-3C5E05_16390Not AvailablePositive3482401 - 348307224736.2
50s ribosomal protein l35C5E05_16395Not AvailablePositive3483072 - 34832667074.82
50s ribosomal protein l20C5E05_16400Not AvailablePositive3483306 - 348369214448.6
rna methyltransferaseC5E05_16405Not AvailablePositive3483869 - 348466928449.7

Displaying genes 3231 – 3240 of 3882 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.