Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1H1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
664956 bp
Thymine Count
661191 bp
Guanine Count
1429804 bp
Cytosine Count
1446370 bp
Genome Length
4202523 bp
Protein-coding Genes
3778 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytoene synthase | C5E05_16360 | Not Available | Positive | 3476077 - 3476946 | 31529.9 |
| phytoene desaturase | C5E05_16365 | Not Available | Positive | 3476943 - 3478511 | 56842.7 |
| monooxygenase | C5E05_16370 | Not Available | Positive | 3478508 - 3479200 | 24545.3 |
| carotenoid biosynthesis protein | C5E05_16375 | Not Available | Positive | 3479286 - 3480125 | 29632.5 |
| phytoene desaturase | C5E05_16380 | Not Available | Positive | 3480122 - 3481648 | 54240.1 |
| duf1844 domain-containing protein | C5E05_16385 | Not Available | Negative | 3481735 - 3482109 | 13048.2 |
| translation initiation factor if-3 | C5E05_16390 | Not Available | Positive | 3482401 - 3483072 | 24736.2 |
| 50s ribosomal protein l35 | C5E05_16395 | Not Available | Positive | 3483072 - 3483266 | 7074.82 |
| 50s ribosomal protein l20 | C5E05_16400 | Not Available | Positive | 3483306 - 3483692 | 14448.6 |
| rna methyltransferase | C5E05_16405 | Not Available | Positive | 3483869 - 3484669 | 28449.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
