Pseudoclavibacter sp. AY1H1

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Pseudoclavibacter

Description

Pseudoclavibacter sp. AY1H1 is a notable bacterium characterized by its single replicon structure, indicating a streamlined genomic organization. The genomic sequence of this organism is cataloged under the accession number PSXX00000000.1, which provides a reference point for studies pertaining to its genetic makeup. The classification of Pseudoclavibacter sp. suggests a relationship with other members of the Actinobacteria phylum, known for their diverse metabolic capabilities and ecological roles. Although specific traits regarding its metabolic pathways or ecological interactions are not provided, members of this genus typically participate in soil and plant-associated environments, which could imply potential interactions with plant systems or contributions to soil health. In summary, Pseudoclavibacter sp. AY1H1 is distinguished by its singular replicon and accession number PSXX00000000.1. While further details about its ecological roles remain unspecified, the characteristics of the Pseudoclavibacter genus suggest potential significance in environmental microbiology, particularly in soil ecosystems. This highlights the importance of studying such organisms to better understand their contributions to biogeochemical cycles and plant health.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusPseudoclavibacter
SpeciesPseudoclavibacter sp. AY1H1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoclavibacter sp. AY1H1 AY1H1_26, whole genome shotgun

Gene Summary

Adenine Count

664956 bp

Thymine Count

661191 bp

Guanine Count

1429804 bp

Cytosine Count

1446370 bp

Genome Length

4202523 bp

Protein-coding Genes

3778 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferaseC5E05_16260Not AvailablePositive3458763 - 345939523228.9
hypothetical proteinC5E05_16265Not AvailablePositive3459392 - 345993118224.0
transcriptional regulatorC5E05_16270Not AvailablePositive3460101 - 346041211438.8
duf3046 domain-containing proteinC5E05_16275Not AvailablePositive3460485 - 34607158355.93
recombinase recaC5E05_16280Not AvailablePositive3460974 - 346205338226.9
hypothetical proteinC5E05_16285Not AvailablePositive3462050 - 346289230092.0
hypothetical proteinC5E05_16290Not AvailableNegative3462854 - 346371729629.7
trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miabC5E05_16295Not AvailablePositive3463863 - 346538655258.5
trna (adenosine(37)-n6)-dimethylallyltransferase miaaC5E05_16300Not AvailablePositive3465383 - 346630033146.4
diaminopimelate epimeraseC5E05_16305Not AvailablePositive3466356 - 346726731869.8

Displaying genes 3211 – 3220 of 3882 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.