Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1H1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
664956 bp
Thymine Count
661191 bp
Guanine Count
1429804 bp
Cytosine Count
1446370 bp
Genome Length
4202523 bp
Protein-coding Genes
3778 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | C5E05_16110 | Not Available | Positive | 3421741 - 3422313 | 20010.9 |
| hypothetical protein | C5E05_16115 | Not Available | Negative | 3422347 - 3422775 | 15032.0 |
| hypothetical protein | C5E05_16120 | Not Available | Positive | 3422889 - 3423299 | 14802.6 |
| mevalonate kinase | C5E05_16125 | Not Available | Positive | 3423425 - 3424372 | 32141.4 |
| diphosphomevalonate decarboxylase | C5E05_16130 | Not Available | Positive | 3424339 - 3425376 | 35608.1 |
| phosphomevalonate kinase | C5E05_16135 | Not Available | Positive | 3425271 - 3426461 | 41646.4 |
| type 2 isopentenyl-diphosphate delta-isomerase | C5E05_16140 | Not Available | Positive | 3426454 - 3427539 | 38223.4 |
| hydroxymethylglutaryl-coa reductase | C5E05_16145 | Not Available | Positive | 3427536 - 3428582 | 37883.1 |
| hydroxymethylglutaryl-coa synthase | C5E05_16150 | Not Available | Positive | 3428609 - 3429781 | 42147.0 |
| universal stress protein uspa | C5E05_16155 | Not Available | Positive | 3429813 - 3430655 | 28713.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
