Pseudoclavibacter sp. AY1H1

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Pseudoclavibacter

Description

Pseudoclavibacter sp. AY1H1 is a notable bacterium characterized by its single replicon structure, indicating a streamlined genomic organization. The genomic sequence of this organism is cataloged under the accession number PSXX00000000.1, which provides a reference point for studies pertaining to its genetic makeup. The classification of Pseudoclavibacter sp. suggests a relationship with other members of the Actinobacteria phylum, known for their diverse metabolic capabilities and ecological roles. Although specific traits regarding its metabolic pathways or ecological interactions are not provided, members of this genus typically participate in soil and plant-associated environments, which could imply potential interactions with plant systems or contributions to soil health. In summary, Pseudoclavibacter sp. AY1H1 is distinguished by its singular replicon and accession number PSXX00000000.1. While further details about its ecological roles remain unspecified, the characteristics of the Pseudoclavibacter genus suggest potential significance in environmental microbiology, particularly in soil ecosystems. This highlights the importance of studying such organisms to better understand their contributions to biogeochemical cycles and plant health.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusPseudoclavibacter
SpeciesPseudoclavibacter sp. AY1H1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoclavibacter sp. AY1H1


Gene Summary

Adenine Count

664956 bp

Thymine Count

661191 bp

Guanine Count

1429804 bp

Cytosine Count

1446370 bp

Genome Length

4202523 bp

Protein-coding Genes

3778 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amidohydrolaseC5E05_16005Not AvailablePositive3393529 - 339479144122.5
50s ribosomal protein l21C5E05_16015Not AvailablePositive3397959 - 339826711257.9
50s ribosomal protein l27C5E05_16020Not AvailablePositive3398286 - 33985408800.55
gtpase obgeC5E05_16025Not AvailablePositive3398646 - 340015454320.2
hypothetical proteinC5E05_16030Not AvailablePositive3400183 - 34004529673.73
nicotinic acid mononucleotide adenylyltransferaseC5E05_16035Not AvailablePositive3400473 - 340110223259.8
hypothetical proteinC5E05_16040Not AvailablePositive3401099 - 340193829125.2
ribosome silencing factorC5E05_16045Not AvailablePositive3402009 - 340241315097.8
sulfite exporter taue/safe family proteinC5E05_16050Not AvailablePositive3402410 - 340320426618.8
Trna-alaNot AvailableNot AvailablePositive3403281 - 3403356Not Available

Displaying genes 3161 – 3170 of 3882 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.