Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Pseudoclavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Pseudoclavibacter |
| Species | Pseudoclavibacter sp. AY1H1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
664956 bp
Thymine Count
661191 bp
Guanine Count
1429804 bp
Cytosine Count
1446370 bp
Genome Length
4202523 bp
Protein-coding Genes
3778 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5E05_14735 | Not Available | Negative | 3103436 - 3104293 | 30972.2 |
| gfo/idh/moca family oxidoreductase | C5E05_14740 | Not Available | Negative | 3104290 - 3105357 | 37954.6 |
| mfs transporter | C5E05_14745 | Not Available | Negative | 3105476 - 3106816 | 47566.6 |
| fusc family protein | C5E05_14750 | Not Available | Negative | 3106928 - 3107965 | 35740.0 |
| l-rhamnose isomerase | C5E05_14755 | Not Available | Positive | 3108293 - 3109459 | 42879.4 |
| bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenase | C5E05_14760 | Not Available | Positive | 3109502 - 3111538 | 71719.8 |
| rhamnulokinase | C5E05_14765 | Not Available | Positive | 3111535 - 3113016 | 52229.9 |
| alpha-hydroxy-acid oxidizing enzyme | C5E05_14770 | Not Available | Positive | 3113036 - 3114295 | 45686.3 |
| had family hydrolase | C5E05_14775 | Not Available | Negative | 3115215 - 3116078 | 31704.2 |
| duf2945 domain-containing protein | C5E05_14780 | Not Available | Negative | 3116089 - 3116301 | 7788.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
